Structural variants in 3000 rice genomes

Описание

Тип публикации: статья из журнала

Год издания: 2019

Идентификатор DOI: 10.1101/gr.241240.118

Аннотация: Investigation of large structural variants (SVs) is a challenging yet important task in understanding trait differences in highly repetitive genomes. Combining different bioinformatic approaches for SV detection, we analyzed whole-genome sequencing data f

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Издание

Журнал: GENOME RESEARCH

Выпуск журнала: Vol. 29, Is. 5

Номера страниц: 870-880

ISSN журнала: 10889051

Место издания: COLD SPRING HARBOR

Издатель: COLD SPRING HARBOR LAB PRESS, PUBLICATIONS DEPT

Авторы

  • Rommel Fuentes Roven (Int Rice Res Inst, Laguna 4031, Philippines; Wageningen Univ & Res, Bioinformat Grp, NL-6708 PB Wageningen, Netherlands)
  • Chebotarov Dmytro (Int Rice Res Inst, Laguna 4031, Philippines)
  • Duitama Jorge (Univ Los Andes, Syst & Comp Engn Dept, Bogota 111711, Colombia; Int Ctr Trop Agr CIAT, Agrobiodivers Res Area, Cali 6713, Colombia)
  • Smith Sean (Rutgers State Univ, Biol Dept, Ctr Computat & Integrat Biol, Camden, NJ 08102 USA)
  • Fernando De la Hoz Juan
  • Mohiyuddin Marghoob (Roche Sequencing Solut, Belmont, CA 94002 USA)
  • Wing Rod A. (Int Rice Res Inst, Laguna 4031, Philippines; Univ Arizona, Arizona Genom Inst, Tucson, AZ 85721 USA; King Abdullah Univ Sci & Technol, Thuwal 23955, Saudi Arabia)
  • McNally Kenneth L. (Int Rice Res Inst, Laguna 4031, Philippines)
  • Tatarinova Tatiana (Univ La Verne, Dept Biol, La Verne, CA 91750 USA; Vavilov Inst Gen Genet, Moscow 119333, Russia; Russian Acad Sci, AA Kharkevich Inst Informat Transmiss Problems, Moscow 127051, Russia; Siberian Fed Univ, Lab Forest Genom, Krasnoyarsk 660041, Russia)
  • Grigoriev Andrey (Rutgers State Univ, Biol Dept, Ctr Computat & Integrat Biol, Camden, NJ 08102 USA)
  • Mauleon Ramil (Int Rice Res Inst, Laguna 4031, Philippines)
  • Alexandrov Nickolai (Int Rice Res Inst, Laguna 4031, Philippines)

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